Browse of TCMCG073C26604 protein

CDS

Accession Number	TCMCG073C26604
gbkey	CDS
Protein Id	XP_010552283.1
Location	join(841657..841680,842476..842546,842662..842801,842882..842968,843138..843225,843299..843379,844169..844246,844340..844419,844791..844917,845314..845373,845816..846062,846232..846280,846369..846502,846785..847828,847830..848123,848274..848451,848583..848700,848933..849020,849149..849227,849369..849664,849782..850868,851033..851404,851524..852128)
Gene	LOC104822680
GeneID	104822680
Organism	Tarenaya hassleriana

Protein

Length	1808aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA268022
db_source	XM_010553981.1
Definition	PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACTAATGTTTTCAGAATTGGTGGTCTTCATAATGTATCATGGTTTCAGTTTCTCCCAAGTGAATCCGAGCTGCCATCTCCTGATAGAAGTTCTAGAGCTGAACAGAATGATGTTGCAATATATCTTGTGCTCTCATCTTATCTACGGTTGCAGAAGGAAGGCTTTCTCAGCACATGGACAAATTCTTTTGTTGGACCCTGGGATCCATCTCAAGGTCTACACAACCCTGATGAAAAGATCAAGCTTTGGCTCTTTATCCCTGGGCGGCATGCATCTGTTACTGAAAATGCTCAGTCCGCAATCTCAAAACTTAGAGTTGTTGCGTCAGGATTTTGGGTGGCTCCTGGGGATTCCGAAGAGGTTTCTGTTGCCCTTTCTCAGGCATTGCGTAATTGCATTGAAAGAGCAATACTTGGACTTTCCTACATGAGGTTTGGAGATGTATTTTCCAAATTCAGCCCTTCTCAAAGCAAAGAATATTTCAGGAGGGGGCAACCTACAGTTGAATTTGTCTTTGCTACAACGGAAGAGGCAATTTTTGTCCATGCCATTATAACTGCCAAGAACGTTCGGACACTTTCAAGTGGAGATTCTGAAAGAATATTACGGAGTTCGTTGAAAAATTCCGGATACAAGCTTCCGGGGAGTAAGGGCAATCAGAAGGTGTTACCAGACCGCTTTTCAGCATATGAGAAAAGGTTCATATATCCAGCCGAGGCAGTGCTTGTACCAGTCTTGCAGTCAACATTTCCTAGATTTTCCTTGAAAAGATTTTGGCTTCAAAACTGGATAGGACCGTCGTTAGCAGGCTCATCATTATTTATGCACTGGGCTGGTGATTTTGATTTCCTTGGGGTGTCTGGAAATAAAAGTGGTGGCTTCTACATGCCAAATGGTTATAGTAGCAGTGGCAGCAGCAATTGTAGCAGCATTAGTTCGACAAGTAGCACTTCTAGTGAGAGTGATGGCAAGATAACCTCAAGAACTGGTGAACTTGTGGCAGATGCAGATTCTGGGATATGTAGGCAATCAGGTCTATCTTCTAATGATCAGCTGGACTACGATGGTCAGAAAATGGGTTCTAAGCGGCCCCGAACAGGGATGGAAGAGTCATTCGGTCAAGTAGGCATGGCAAACGATCAAGTTGGTTGGGACTGGGATAATGATGATAGAGGAGCTGGCATGGATATCCAAGCTCTTCTATCTGAGTTTGGAGACTTTGGTGACTTCTTTGAAAATGATGCTTTGCCTTTTGGGGAGCCTCCAGGGACAGCAGAGTCACAAGCACTAATGCTTCCTCCAGATTGCGCAGATGTAGATTCTAGTCCTGTGGGTATGATGGATGTATCGGACCAGATGCTTTTGCCTGTAGGCTTCCCATCCTTTGAGAGCTTTAATCCTGTCCCCCCTGTCATGGATGAGTGTCTTGACAAAAGTCAAGAAGTCCTCGCAAACAGTGTCGTGTCTGCTCCTTTAAGCCAATTGCCAGCCTCTTATACTGGCGAGTTTGATCATTTGATGAAAGAAGAGGCTATGATGACCTTTGCTCCAGAGTATGGGGCTGTAGAAACTCCCACGAGTGAGATATCTTACACCTCTTTCAAAGGCTCCTATCTTCCTCAATCTCGTAAAGTGGAACGCTCAAATCCAAGGACAAATGACCATGTATATGATGCTACTCCACCTTCCATTGCTACTGATGGATCAGAGGATAAGGTGATGCTTGGATCAAAAGCATTAATTGGTAAATACGATGGACCAAGGAAGTACTACACTCAGGTAGAGGGAAGCAAGGAGCAAAATGATAAGCGGACTACTACAAACAGTGATGCCAGTAGAAAGGAGGGTGTTTCCCAATCTCAGTTCTCAAATTATAGTTCTGCTGGTTCTATCAAAACTGTACCGGGGAAAAGGACAGATCGCACATCTGCTGCAAGTAGTATTTTGTTGTCTTCAAAGACCTTGCTGGCAACTGGTATTGAAAGCATTATGTACCAAGCTTTCATGTGTAGAATGCGGCACGCGGTCATTTCTCCAAATCACAGTTCACCTTTTAGTTTGACCAGGTTTAATGCAAATTCTTTTCTTACCCAGATGCCCACTGAGCCTAGTACTCTGTCAGACAACACATCTATTATGATAGAGATGAAGAAGAAAGACATACCTACCAGAATAGCTGGCGATCTTGATGGAGGAATGCTAGATAGTCACATGAGTGCACCAGTTGGTGTGTGGCGTACTGTGGGGGCCCCAAATGCAGCAAAACCTGCTGATTCACCAAATGTTGAAGCAGGCTCATCATTGCCCCATAGTTCTTTTAACGAAGATAACTTACTTTCTTATGGTCAAAGGCAGCCTCTTCAGGAACTCCTTGACGGTATAGCGTTACTTGTACAGCAAACTACTTCGTTTGTTGATTTAGCACTGGATTCAGACTGTGGTAATGGACCTTACGGCTGGCTTGCACTAAACGAAATGTGGAGACGTGAACTTTCTTGTGGCCCATCAAGTATCCATGCAGGTTGTGGGGGGACTCTGGCCTCTTGCCATTCTCTGGACATTGCTGGTGTCAAGCTAGTAGATCCGCTTTCAGTTGAGATTCTTCCTTCATCTGTAATCAATCTGCTGCAATCTGATATTAAAACAGCTCTTAAAACTGCGTTTAGCCAGTTGGATGGCCCATTAACTGTCACAGATTGGTGCAAAGGCCGCAATCCATCAGGGGATGGAGGTGCCATTCCTGAAGGATCTACTGCTGAGTCAGCAGTTAGTGAGGTTTCTAATGCTTTAGATGGCGGAAAATTAGATGACACAGCTCAGAGCCAAGATGTCTACAGCTCAGAATTACTCAGACCGACACTTTTTGTTCTTCCTTCACCTTCTATACTTGTTGGATACCAGGATGACTGGCTTAAAACGTCACCAAATTCCTTGCCTCAGTGGGAAAAGGCCCCTTTTGAGCCCTACGCTCTGCCAAAAAATGTTAGTTATACCGTAGTATGCCCAGACATTGATCCTCTAATCTTTGCTGCCGCTGATTTCTTCCAGCAACTTGGTACTGTTTATGAGACGTGCAGGCTGGGAACCCACTTGCCCCACAGTGTTGGAAATCAAATGGAAATAGACTCTGGGAAGTTGTCGGCATCCGGTTTTGTTCTGCTTGATTGCCCTCAGTCGATGAAGATTGAAAGCAATAATACGTCACTTCTTGGATCGCTAAGTGATTATTTTCTGTCTTTGTCAAATGGGTGGAATGTAACAAGCTATCTGAAATCTTTATCAAAAGCACTAAAGGGACTTAAGCTTGGATCTTGCCTACACATGAACCAAAAGGAAGGAACTGGGAGTTCTTGTATGGTTGTGTACATTGTGTGTCCATTTCCTGACCCTTCAGCTATCCTAAAGACAGTAATTGAATCATCTGTTGCACTTGGATCAGTAATTTTACAGTCAGATAGAGACAGGAGATCGATACTTCATAGTCAGGTTGCAAGGGTGTTGAGTAGTTCTGCTGCTGCAGATGAAGCTGCAATATCTCAAATCCCAGTGCTTTCGGGGTTTAGTATTCCTAAACTTGTCCTGCAGGTGGTGACTGTCGATTCTGTTTTCCGGATAACAAGTCCAACTTTTAATGAGCTTGTCATTCTTAAGGACACTGCTTTTTCTGTATACAATAAGGCACGTAGGATTGCACGAGGATCGCCTAATGATGCATTGATGTCATCAAATTTGCCAAGCAGATCCCCGCCAGTCTTGACACCGATGAGTTCTATTCCAGGAATATGGAAGGACTGTGTTGGTTCTCGAATGACAGGATCTTCACTAGCGAGAGAGAGCGAAATTGATGCTACCTTGAGGACCAGTGCTTGGGATAATTCCTGGCAAACAGCAAGATCTGGAGCATTAAGCTGCGATCCAAGCAGAAATGGGGATTTCTACCTTAGTGACGAAGTTTGCTATTTGTTTGAACCGCTTTTTATTCTTTCCGAACCTGGCTCTGTAGAGCATGGAATTTCACCTAATTTTGGGGGTATGGTGTCAGAAGCTTCAAAGCCAGTGCCTGAGGATGGTAACAGAGGTTACGGACAAAGTGGGAGTTCAATGGAAGGTATAAATTCAGGTTCTGGTTCTCAGGTTGATACATCCCAGCTTGATGAAAAGGCTCCTCCAAGCCTGCATTGTTGTTACGATTGGACAGAGGACTGGAGGTGGCTTATAAGCATCTGGACTGATTCTAGAGGTGAATTGCTCGACAGCCATATATTTCCTTTCGGCAGAATCAGTAGTAGACAGGATACAAAAGGGCTGCAATGTCTTTTTGTGCAAGTTCTGCAGCATGGATGTCAGATACTGCAGGCGTGCTCTTCTCCTGATACCGGATCTTTCAAGCTCAGAGATTTTGTGATTACTCGCATTGGGAATTTCTTTGAGCTTGAATATCAAGAGTGGCAGAAAGCAATTTTCTTAGCTGGGGGCCCCGATATTAAGAAGTGGCCTATTCAGCTTCGACAATCTGTGCATACAGGCATAGCAGCCAATAGCAACGGAACTTCCTTGCAACAGCAGGATCTGAGTTTGATTCAAGATAGGTCCCTGCCCTCATCAACTAGCAATCTTTACACCTCTCATGCAAAGCCGTCTACCTTTGTAAAAGGTGGTATTGGACAAACTGCTGGAAGAAAGCAGATCATGGGTACTCAACCTGTTGCTGACATCCCGAGGGGATTGCTTCAGTGGGTTCGTAGCATCAGTTTTGCCTCTGTTTCCCTTGATCATTCTTTACATTTTGTTTACCCTGTGGAGTCAGTATCTCCTGGTGGTGGCCAGAGTGGTAACAGTTTGGGTTCGTTAGGTTATCTCGAGGGTTTCACCCCTGTCAGATCTCTTGGGTCTACGCCTGTCTCTTACATGCTAATACCATCGCCGAACATGCGCTTTTTACACCCAAGTCCGCTTCAACTTCCGACTTGTTTAACTGCCCAGTCTCCTCCACTTGCTCACCTCCTTCATAGCAAGGGCAGTGCAACCCCAATATCTACCGGTTTTGTTGTTTCTAAAGCGGTGCCTTCTTTGAAAAAGGACTCAAGGATGAACATGAAAGAAGAATGGCCCTCAGTGCTCTCTGTCAGTCTCATTGACTATCATGGTGGCTACAGTCTCGCTCATGACAAAATTCTCCAAGGGATTATGAAGCAGGGCAGCGGGACCAAAGAAACAAGAGATTTCGAGATTGAAAGCCATCTAATCCTTGAGTCTGTCGCAGCCGAACTCCATGCTCTGTCATGGATGACAGTTAGTCCTGCATATCTGGACCGGCGAACAGCATTGCCTTTTCACTGTGATGCGGTTCTGAGACTCAGACGTCTGCTTCATTTTGCGGACAAAGAACTCTCAAGGCAACCGGATAAGTCGCAAGTTTGA

Protein:   MWTNVFRIGGLHNVSWFQFLPSESELPSPDRSSRAEQNDVAIYLVLSSYLRLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHASVTENAQSAISKLRVVASGFWVAPGDSEEVSVALSQALRNCIERAILGLSYMRFGDVFSKFSPSQSKEYFRRGQPTVEFVFATTEEAIFVHAIITAKNVRTLSSGDSERILRSSLKNSGYKLPGSKGNQKVLPDRFSAYEKRFIYPAEAVLVPVLQSTFPRFSLKRFWLQNWIGPSLAGSSLFMHWAGDFDFLGVSGNKSGGFYMPNGYSSSGSSNCSSISSTSSTSSESDGKITSRTGELVADADSGICRQSGLSSNDQLDYDGQKMGSKRPRTGMEESFGQVGMANDQVGWDWDNDDRGAGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQALMLPPDCADVDSSPVGMMDVSDQMLLPVGFPSFESFNPVPPVMDECLDKSQEVLANSVVSAPLSQLPASYTGEFDHLMKEEAMMTFAPEYGAVETPTSEISYTSFKGSYLPQSRKVERSNPRTNDHVYDATPPSIATDGSEDKVMLGSKALIGKYDGPRKYYTQVEGSKEQNDKRTTTNSDASRKEGVSQSQFSNYSSAGSIKTVPGKRTDRTSAASSILLSSKTLLATGIESIMYQAFMCRMRHAVISPNHSSPFSLTRFNANSFLTQMPTEPSTLSDNTSIMIEMKKKDIPTRIAGDLDGGMLDSHMSAPVGVWRTVGAPNAAKPADSPNVEAGSSLPHSSFNEDNLLSYGQRQPLQELLDGIALLVQQTTSFVDLALDSDCGNGPYGWLALNEMWRRELSCGPSSIHAGCGGTLASCHSLDIAGVKLVDPLSVEILPSSVINLLQSDIKTALKTAFSQLDGPLTVTDWCKGRNPSGDGGAIPEGSTAESAVSEVSNALDGGKLDDTAQSQDVYSSELLRPTLFVLPSPSILVGYQDDWLKTSPNSLPQWEKAPFEPYALPKNVSYTVVCPDIDPLIFAAADFFQQLGTVYETCRLGTHLPHSVGNQMEIDSGKLSASGFVLLDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVTSYLKSLSKALKGLKLGSCLHMNQKEGTGSSCMVVYIVCPFPDPSAILKTVIESSVALGSVILQSDRDRRSILHSQVARVLSSSAAADEAAISQIPVLSGFSIPKLVLQVVTVDSVFRITSPTFNELVILKDTAFSVYNKARRIARGSPNDALMSSNLPSRSPPVLTPMSSIPGIWKDCVGSRMTGSSLARESEIDATLRTSAWDNSWQTARSGALSCDPSRNGDFYLSDEVCYLFEPLFILSEPGSVEHGISPNFGGMVSEASKPVPEDGNRGYGQSGSSMEGINSGSGSQVDTSQLDEKAPPSLHCCYDWTEDWRWLISIWTDSRGELLDSHIFPFGRISSRQDTKGLQCLFVQVLQHGCQILQACSSPDTGSFKLRDFVITRIGNFFELEYQEWQKAIFLAGGPDIKKWPIQLRQSVHTGIAANSNGTSLQQQDLSLIQDRSLPSSTSNLYTSHAKPSTFVKGGIGQTAGRKQIMGTQPVADIPRGLLQWVRSISFASVSLDHSLHFVYPVESVSPGGGQSGNSLGSLGYLEGFTPVRSLGSTPVSYMLIPSPNMRFLHPSPLQLPTCLTAQSPPLAHLLHSKGSATPISTGFVVSKAVPSLKKDSRMNMKEEWPSVLSVSLIDYHGGYSLAHDKILQGIMKQGSGTKETRDFEIESHLILESVAAELHALSWMTVSPAYLDRRTALPFHCDAVLRLRRLLHFADKELSRQPDKSQV